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Development of RAPD Markers and SCAR Markers Linked to Bentazon Susceptible Lethality Gene in Rice

文献类型: 外文期刊

作者: Xiang, TH 1 ; Yang, JB 2 ; Li, L 2 ; Ni, DH 2 ; Yang, QJ 2 ; Zhu, QS 2 ; Wang, XF 2 ; Zhang, Y 2 ; Huang, DN 2 ;

作者机构: 1.Zhejiang Univ, Coll Life Sci, Hangzhou 310012, Peoples R China

2.Zhejiang Univ, Coll Life Sci, Hangzhou 310012, Peoples R China; Natl Agr Minist, Anhui Acad Agr Sci, Rice Res Inst, Key Lab Rice Genet & Breeding, Hefei 230031, Peoples R China; Anhui Acad Agr Sci, Nat Nourishing Food Engn Inst, Hefei 230031, Peoples R China; China Natl Rice Res Inst, Hangzhou 310006, Peoples R China

关键词: rice (oryza saliva);bentazon susceptible lethality gene;RAPD marker;SCAR marker

期刊名称:ACTA BOTANICA SINICA ( 影响因子:0.599; )

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收录情况: SCI

摘要: Rice cultivar Norin 8 and its mutant Norin 8m harbour bentazon resistance trait and bentazon susceptibility trait respectively. A total of 360 arbitrary 10-mer oligonucleotide primers were screened on the ge-nomic DNA of Norin 8 and Norin 8m with RAPD technique. Among which, five primers produced seven polymorphic RAPD bands between Norin 8 and Norin 8m. Amplified RAPD polymorphic products were cloned and sequenced. The sequences were used to design primers for PCR. Five SCAR markers, SCAR/G18/883, SCAR/G18/890, SCAR/G18/919/948, SCAR/D10/1237 and SCAR/F03/1186, were developed from OPG18/943, OPG18/972, OPD10/1248 and OPF03/1198. F2 progeny of 320 individuals was analyzed to map SCAR markers in relationship to ben or Ben genes. SCAR markers of SCAR/G 18/883, SCAR/G18/ 890, SCAR/G18/919/948 were shown to cosegregate with ben or Ben genes, and SCAR/D10/1237 to be linked of Ben gene with a distance of (14.8+-2.1) cM. The genetic linkage to ben gene and SCAR markers was identified by a pair of near isogenic lines H121 and Hben121. Southern blotting analysis and segregation ratio of F_2 progeny revealed that OPG18/943 and OPG18/972 were single-copy in genome, and locus of OPG18/943 and OPG18/972 were allelic and sequence tagged sites. It is the first report on molecular markers linked to ben or Ben genes. The markers are useful to marker-assisted selection for the breeding and tag ben gene with map-based cloning.

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