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Identification of sheath blight QTL in a LaGrue x Oryza nivara rice advanced backcross population

文献类型： 外文期刊

作者： Eizenga, Georgia C. 1 ; Li, Danting 2 ; Jia, Melissa H. 1 ; Huggins, Trevis D. 1 ; Jackson, Aaron K. 1 ;

作者机构： 1.USDA ARS, Dale Bumpers Natl Rice Res Ctr, 2890 Hwy 130 E, Stuttgart, AR 72160 USA

2.Guangxi Acad Agr Sci, Rice Res Inst, Guangxi Key Lab Rice Genet & Breeding, Nanning, Guangxi, Peoples R China

关键词： Oryza sativa; Rhizoctonia solani; Advanced-backcross; QTL mapping; Asian rice; Oryza nivara; Sheath blight disease

期刊名称：EUPHYTICA （ 影响因子：2.185； 五年影响因子：2.387 ）

ISSN： 0014-2336

年卷期： 2022 年 218 卷 11 期

页码：

收录情况： SCI

摘要： Oryza nivara is considered one of the wild progenitors of cultivated Asian rice (O. sativa). An O. nivara (IRGC104443) accession, previously identified as being moderately resistant to rice sheath blight disease, was used as the donor parent to develop an advanced backcross population with the U.S. rice (O. sativa) cultivar, LaGrue, as the recurrent parent. The population was genotyped with 210 DNA markers and a linkage map constructed that spanned 1488.9 cM. Sheath blight (ShB) disease was evaluated in both greenhouse and field conditions. Days to heading (DTHD), plant height (PTHT) and culm (angle) habit (CULMHAB) were recorded because they can confound sheath blight disease ratings under field conditions. Multiple interval mapping identified qShB9 as the ShB-QTL being the source of resistance and the resistance was attributed to the O. nivara allele. The single CULMHAB QTL, qCULMHAB9, was also located in this region but had a different peak suggesting the more open tillering was most likely due to the TILLER ANGLE CONTROL-1 gene which was fine-mapped near the chromosome 9 ShB resistance in other O. sativa populations. The ShB QTL, qShB3-2-mc, identified in the greenhouse study was not verified in the field studies. None of the three DTHD QTL were colocalized with ShB QTL, while the single PTHT QTL was mapped to the region of the semi-dwarf-1 gene for short stature on chromosome 1. Further studies will be undertaken to fine map the qShB9 region and identify linked markers for use in cultivar development.

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