Characterization and Phylogenetic Analysis of the Complete Mitochondrial Genome of Saturnia japonica
文献类型： 外文期刊
作者： Liu, Jiang 1 ; Dai, Junjun 2 ; Jia, Jinjin 1 ; Zong, Yemei 1 ; Sun, Yahao 1 ; Peng, Ying 1 ; Wang, Lei 1 ; Qian, Cen 1 ; Zhu 1 ;
作者机构： 1.Anhui Agr Univ, Sch Life Sci, Hefei 230036, Peoples R China
2.Anhui Acad Agr Sci, Sericultural Res Inst, Hefei 230061, Peoples R China
关键词： Saturnia japonica; Mitochondrial genome; Genome organization; Phylogeny
期刊名称：BIOCHEMICAL GENETICS （ 影响因子：1.89； 五年影响因子：1.959 ）
ISSN： 0006-2928
年卷期：
页码：
收录情况： SCI
摘要： The complete mitochondrial genome (mitogenome) of Saturnia japonica (Lepidoptera: Saturniidae) was sequenced and annotated. It is a circular molecule of 15, 376 bp, composed of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNA), and an adenine (A) + thymine (T)-rich region. All protein-coding genes (PCGs) are initiated by the ATN codon except for cytochrome c oxidase subunit 1 (cox1) gene that is seemingly initiated by the CGA codon. Except for cox2 and nad4, which were terminated by incomplete stop codon T or TA, the rest were terminated by canonical stop codon TAA. The A + T-rich region is high conservative, including 'ATAGA' motif followed by a 19 bp poly-T stretch, a microsatellite-like element (AT)(9) and also a poly-A element, with a total length of 332 bp. The Asn codon was the most frequently used codon, followed by Ile, Leu2, Lys, Met, Phe, and Tyr, while Cys was the least frequently used codon. Phylogenetic relationships analysis based on the 13 PCGs by using maximum likelihood (ML) and neighbor Joining (NJ) revealed that S. japonica belongs to the Saturniidae family. In this study, the annotation and characteristics of the mitogenome of S. japonica were resolved for the first time, which laid a foundation for species classification and the molecular evolution of Lepidoptera: Saturniidae.
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