Comparative transcriptome analysis reveals differentially expressed genes related to the tissue-specific accumulation of anthocyanins in pericarp and aleurone layer for maize
文献类型: 外文期刊
作者: Li, Tingchun 1 ; Zhang, Wei 1 ; Yang, Huaying 1 ; Dong, Qing 1 ; Ren, Jie 1 ; Fan, Honghong 2 ; Zhang, Xin 2 ; Zhou, Ying 1 ;
作者机构: 1.Anhui Acad Agr Sci, Tobacco Res Inst, Corn Res Ctr, Hefei 230031, Anhui, Peoples R China
2.Anhui Agr Univ, Sch Life Sci, Hefei 230036, Anhui, Peoples R China
期刊名称:SCIENTIFIC REPORTS ( 影响因子:4.379; 五年影响因子:5.133 )
ISSN: 2045-2322
年卷期: 2019 年 9 卷
页码:
收录情况: SCI
摘要: Purple corn is a rich source of anthocyanins. In the experiment, two anthocyanins-enriched purple corn lines Ha0414 and Ha6130 were identified. The anthocyanins were respectively accumulated in the pericarp of Ha0414 and the aleurone layer of Ha6130 with different composition and content. Transcriptome analysis of the two tissues in both lines identified 16 and 14 differentially expressed genes belonging to anthocyanin metabolism pathway in pericarp and the aleurone layer, individually. Of these genes, two genes encoding 2-oxoglutarate (2OG) and Fe (II)-dependent oxygenase superfamily proteins, and one gene annotated as UDP-glycosyltransferase superfamily protein exhibited increased transcript abundance in both the colored pericarp and aleurone layer. Otherwise, one gene annotated as flavonoid 3', 5'-hydroxylase, and another gene encoding flavonoid 3'-monooxygenase displayed increased transcript abundance in the aleurone layer of Ha6130. Moreover, 36 transcription factors were identified with increased transcript abundance in the pericarp of Ha0414, such as bHLH transcription factors, WRKY transcription factors, and HB transcription factors. And 79 transcription factors were isolated with an increased expression level in the aleurone layer of Ha6130, including MYB transcription factors, MYB-related transcription factors, and bHLH transcription factors. These genes expression may result in the tissue-specific accumulation of anthocyanins in pericarp and aleurone layer.
- 相关文献
作者其他论文 更多>>
-
Identification of Copy Number Variations and Selection Signatures in Wannan Spotted Pigs by Whole Genome Sequencing Data: A Preliminary Study
作者:Zhang, Wei;Zhou, Mei;Liu, Linqing;Li, Xiaoyu;Su, Shiguang;Wang, Chonglong;Jiang, Yao;Ni, Zelan
关键词:Wannan spotted pig; Asian wild boar; copy number variation; selection signatures; whole genome resequencing
-
Microbial regulatory mechanisms of disease-resistant tobacco varieties in the prevention and control of bacterial wilt disease
作者:Xia, Hao;Shen, Jia;Yang, Huaying;Dong, Qing;Zu, Chaolong;Yu, Fei;Yan, Yifeng;Li, Jiaxin;Jiang, Chaoqiang;Liu, Bo;Riaz, Muhammad
关键词:Bacterial wilt disease; Different variety; Rhizosphere microorganism; Soil metabolites; Physicochemical properties
-
An Earthworm Peptide Alters Soil Nematode, Microbial, and Nutrient Dynamics: A Novel Mechanism of Soil Food Web Feedbacks
作者:Yu, Fei;Qi, Yaocheng;Yan, Yifeng;Xia, Hao;Dong, Qing;Jiang, Chaoqiang;Zu, Chaolong;Shen, Jia
关键词:cyclic peptide; soil microbes; soil base respiration; nitrate nitrogen; diversity
-
Copy number variants selected during pig domestication inferred from whole genome resequencing
作者:Zhang, Wei;Xu, Chengliang;Zhou, Mei;Liu, Linqing;Su, Shiguang;Wang, Chonglong;Ni, Zelan
关键词:Wanbei pig; Asian wild boar; copy number variation (CNV); selection signature; whole genome resequencing
-
Genome-wide investigation of the PYL genes in Acer palmatum and their role in freezing tolerance
作者:Zhu, Lu;Yan, Kunyuan;Ma, Qiuyue;Du, Yiming;Li, Shushun;Li, Qianzhong;Ren, Jie;Chen, Zhu;Wang, Yuelan
关键词:Acer palmatum; PYL transcription factor; ABA; Expression profile; Freezing tolerance
-
Genome-Wide Detection for Runs of Homozygosity in Baoshan Pigs Using Whole Genome Resequencing
作者:Li, Wenjun;Wu, Lingxiang;Meng, Xintong;Huo, Jinlong;Fu, Guowen;Zhao, Guiying;Wu, Xudong;Zhang, Wei;Xiang, Decai;Yin, Zongjun
关键词:local breed; whole genome resequencing; runs of homozygosity; inbreeding coefficient; candidate gene
-
Identification of Breed-Specific SNPs of Danish Large White Pig in Comparison with Four Chinese Local Pig Breed Genomes
作者:Wu, Xudong;Zhang, Wei;Xiang, Decai;Ma, Yu;Yin, Zongjun;Zhao, Guiying
关键词:Large White pig; genome; breed-specific; functional analysis